Cytoscape Alternatives
Cytoscape
Cytoscape is an open source software platform for visualizing complex networks and integrating these with any type of attribute data. A lot of plugins are available for various kinds of problem domains, including bioinformatics, social network analysis, and semantic web.
Cytoscape supports many use cases in molecular and systems biology, genomics, and proteomics:
Load molecular and genetic interaction data sets in many formats
Project and integrate global datasets and functional annotations
Establish powerful visual mappings across these data
Perform advanced analysis and modeling using Cytoscape plugins
Visualize and analyze human-curated pathway datasets such as Reactome or KEGG.
Best Commercial Cytoscape Alternatives
Looking for the best programs similar to Cytoscape? Check out our top picks. Let's see if there are any Cytoscape alternatives that support your platform.
Linkurious
CommercialWebAn on-premise graph visualization and analysis software to investigate complex connected data.
Features:
- Data analytics
- Fraud detection
- Graph database
- Graphs
Polinode
CommercialWebPolinode is a tool that makes it easy to perform powerful network analysis. You can either upload your own network data or use the integrated relationship-based survey...
Features:
- Network Analysis
- Real time collaboration
- Software as a Service
KeyLines Graph Visualization Toolkit
CommercialMacWindowsLinuxWebAndroidiPhoneAndroid TabletiPadKeyLines is a JavaScript toolkit for building high-performance graph visualization applications quickly.
Features:
- Diagrams
- Flow chart
- Geospatial analysis
- Graphs
Touchgraph Navigator
CommercialWindowsLinuxTouchGraph is the producer of data visualization software TouchGraph Navigator 2. With TouchGraph Navigator 2, users can upload data and create "interactive network...
Upvote Comparison
Interest Trends
Cytoscape Reviews
Add your reviews & share your experience when using Cytoscape to the world. Your opinion will be useful to others who are looking for the best Cytoscape alternatives.