Cytoscape Alternatives
Cytoscape
Cytoscape is an open source software platform for visualizing complex networks and integrating these with any type of attribute data. A lot of plugins are available for various kinds of problem domains, including bioinformatics, social network analysis, and semantic web.
Cytoscape supports many use cases in molecular and systems biology, genomics, and proteomics:
Load molecular and genetic interaction data sets in many formats
Project and integrate global datasets and functional annotations
Establish powerful visual mappings across these data
Perform advanced analysis and modeling using Cytoscape plugins
Visualize and analyze human-curated pathway datasets such as Reactome or KEGG.
Best Cytoscape Alternatives for Web
If you want similar software to Cytoscape, we have a list for that. Are there Cytoscape alternatives out there? Let's find out.
Linkurious
CommercialWebAn on-premise graph visualization and analysis software to investigate complex connected data.
Features:
- Data analytics
- Fraud detection
- Graph database
- Graphs
Polinode
CommercialWebPolinode is a tool that makes it easy to perform powerful network analysis. You can either upload your own network data or use the integrated relationship-based survey...
Features:
- Network Analysis
- Real time collaboration
- Software as a Service
KeyLines Graph Visualization Toolkit
CommercialMacWindowsLinuxWebAndroidiPhoneAndroid TabletiPadKeyLines is a JavaScript toolkit for building high-performance graph visualization applications quickly.
Features:
- Diagrams
- Flow chart
- Geospatial analysis
- Graphs
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Cytoscape Reviews
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